Science 3D

Europe/Berlin
FLASH Seminar Room (DESY Hamburg)

FLASH Seminar Room

DESY Hamburg

Have a look at the map!
Description
The Science 3D workshop is jointly organized by the Helmholtz Center Geesthacht (HZG), DESY and the PaNdata project. The workshop serves as the HZG Imaging User Meeting and Science3D kickoff.
The first day of the workshop is devoted to users experiments and scientific highlights aiming to illustrate the results such that a non-scientific audience can capture the basic ideas and concepts along the lines of the open-access Science3D project.
The second day focuses on the HZG beamlines at PETRA III and new experimental and technological developments
The third and final day covers aspects related to new tools optimizing the workflow like software and data management as well as compute resources available for users of the HZG beamlines.

The meeting takes place in the FLASH seminar room (Monday & Tuesday) and in Buidling 1b Seminarroom 4 (Wednesday). Please have a look at the Campus map






DESY campus map
Timetable
    • 12:00
      Registration & Refreshments
    • Welcome
      • 1
        Welcome DESY
        Speaker: Prof. Edgar Weckert (DESY)
      • 2
        Welcome HZG
        Speaker: Prof. Andreas Schreyer (HZG)
    • Engineering, Environment, Palaeontology
      • 3
        Introduction and Applications of Synchrotron Tomography
        Speaker: Prof. Astrid Haibel (Beuth-Hochschule für Technik Berlin)
        Slides
      • 4
        3D analysis of deformation and damaging by processing of tomographic images
        Speaker: Jens Nellesen (Universität Dortmund)
      • 5
        Analyzing wood microstruture by SRµCT
        Speaker: Prof. Silke Lautner (Eberswalde University for Sustainable Development)
        Slides
      • 6
        The inner space of soil aggregates - What can we learn from SRµCT to better understand soil processes
        Speaker: Prof. Stefan Peth (Universität Kassel)
      • 7
        Computed tomography in palaeontology - study of fossils from the Upper Jurassic of Portugal and from the Late Permian of Mozambique
        Speaker: Dr Rui Martins (Universität Lissabon)
        Movie
    • Open Access Science3d
      • 8
        Science 3D project
        Speaker: Dr Frank Schluenzen (DESY)
        Slides
    • 15:20
      Coffee Break
    • Bio-Materials
      • 9
        X-ray phase-contrast imaging and its applications
        Speaker: Dr Julia Herzen (TU München)
      • 10
        SRµCT of human tissues, medical implants, and their interfaces
        Speaker: Prof. Bert Müller (University of Basel)
      • 11
        SRµCT of Mineralized Tissues
        Speaker: Prof. Michel Dalstra (University of Aarhus)
    • 17:10
      Break
    • Entomology, Zoology
      • 12
        The use of SRµCT as a powerful technique for the reconstruction of insect anatomy and evolution
        Speaker: Dr Frank Friedrich (Universität Hamburg)
      • 13
        SRµCT as a tool in in modern zoological functional morphology and developmental studies
        Speaker: Dr Jörg Hammel (Universität Jena)
      • 14
        Insights on the inside: vertebrate SRµCT imaging and beyond
        Speaker: Dr Thomas Kleinteich (Universität Kiel)
        Slides
    • 15
      BBQ
    • Welcome
      • 16
        Welcome
        Speaker: Prof. Martin Müller (HZG)
    • Beamlines
      • 17
        Imaging at GEMSP
        Speaker: Dr Felix Beckmann (Helmholtz-Zentrum Geesthacht)
      • 18
        SRµCT at IBL
        Speaker: Dr Fabian Wilde (HZG)
      • 19
        Nano imaging at IBL
        Speaker: Malte Ogurreck (HZG)
      • 20
        SRµCT at HEMS
        Speakers: Alexander Hipp (HZG), Dr Felix Beckmann (Helmholtz-Zentrum Geesthacht)
      • 10:30
        Coffee break
      • 21
        Sample Environment
        Speaker: Dr Fabian Wilde (HZG)
      • 22
        New X-ray optics for imaging
        Speaker: Dr Imke Greving
      • 23
        Mapper Status + First results
        Speakers: Torben Fischer (HZG), Dr Ulrich Lienert (DESY)
    • 12:00
      Beamline Visit and Lunch
    • Technical developments
      • 24
        The UFO-DAQ-Framework for high performance data acquisition in synchrotron applications
        Speaker: Dr Andreas Kopmann (KIT)
      • 25
        Technical Developments for SRµCT
        Speaker: Dr Felix Beckmann (Helmholtz-Zentrum Geesthacht)
      • 26
        Technical Developments for DPCI
        Speaker: Marie-Christine Zdora (TUM)
      • 27
        IBL / HEMS @ PETRA III, Time Schedules
        Speaker: Dr Felix Beckmann (Helmholtz-Zentrum Geesthacht)
    • 15:00
      Coffee Break
    • Users results, feedback, requirements
      • 28
        Synchrotron uCT scans allow an unprecedented insight into insect morphology and evolution
        Speaker: Peter Rühr (Zoological Research Museum Alexander Koenig Bonn, Centre for Molecular Biodiversity Research)
        Slides
      • 29
        Users results, feedback, requirements
    • 30
      Discussion
    • 19:00
      Conference Dinner at “Dübelsbrücker Kajüt”
    • 31
      Introduction
      Speaker: Dr Felix Beckmann (Helmholtz-Zentrum Geesthacht)
    • 32
      Software Pipeline
      Speaker: Igor Khokhriakov (HZG)
    • 33
      Practical Introduction to Parallel Computing with the UFO-Framework
      Speaker: Matthias Vogelgesang (KIT)
    • 10:00
      Coffee and Demonstration of Software
    • 34
      Data preparation for Rapid Prototyping
      Speaker: Dr Frank Friedrich
    • 35
      Computing Resources at DESY
      Speaker: Dr Steve Aplin (DESY)
    • 36
      Summary and Conclusion